The detailed information of tRNA gene sequence


Sequence ID>W131175866
Genome IDARJP01000011
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesRubritalea marina DSM 17716 [ARJP]
Start position on genome 17057
End posion on genome 16983
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaagttcagt
tRNA gene sequence 
GGCACGATAGCTCAGTGGTAGAGTAGAGGACTCATAAGCCTTTGGTCCCGGGTTCAAATC
CCGGTCGTGCTACCA
Downstream region at tRNA end position 
actttttttc
Secondary structure (Cloverleaf model)
>W131175866	Met	CAT
                   t      ACCA actttttttc
                     G + T
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C
                     A - T          T A
                    T     G G C C C     A
        G A        A      | | | | |     A
      T     C T C G       C C G G G     C
      G     | | | +                 T T
      G     G A G T
        T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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