The detailed information of tRNA gene sequence


Sequence ID>W131175878
Genome IDARJP01000021
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesRubritalea marina DSM 17716 [ARJP]
Start position on genome 49459
End posion on genome 49370
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caggatatca
tRNA gene sequence 
GGACAGGTGCCAGAGTGGTCGAATGGGCTCGCCTGGAAAGCGTGTGTGCGCGAAAGCGTA
CCGAGGGTTCGAATCCCTCCCTGTCCGCCA
Downstream region at tRNA end position 
tcttgaacaa
Secondary structure (Cloverleaf model)
>W131175878	Ser	GGA
                   a      GCCA tcttgaacaa
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TGTGCGCGAAAGCGTACC
                    C - G
                    T   T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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