The detailed information of tRNA gene sequence


Sequence ID>W131175881
Genome IDARJP01000025
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesRubritalea marina DSM 17716 [ARJP]
Start position on genome 126147
End posion on genome 126222
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccaaggttca
tRNA gene sequence 
AGGGGTGTAGCTCAATTGGTAGAGTAGCGGTCTCCAAAACCGTTGGTTCAGAGTTCGAGT
CTCTGTGCCCCTGCCA
Downstream region at tRNA end position 
ccttttaaaa
Secondary structure (Cloverleaf model)
>W131175881	Trp	CCA
                   a      GCCA ccttttaaaa
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G + T          T G
                    T     G T C T C     A
      T A A        A      | | | | |     G
    T       C T C G       C A G A G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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