The detailed information of tRNA gene sequence


Sequence ID>W131177112
Genome IDARKO01000002
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesThioalkalivibrio sp. ALJ20 [ARKO]
Start position on genome 11554
End posion on genome 11627
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
acccgataca
tRNA gene sequence 
GGCTGGGTGGCAGAGTGGTTATGCAGCGGACTGCAAATCCGTGTACGCCGGTTCGATTCC
GACCCCAGCCTCCA
Downstream region at tRNA end position 
tcattgcgct
Secondary structure (Cloverleaf model)
>W131177112	Cys	GCA
                   a      TCCA tcattgcgct
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C          T T
                    T     C A G C C     A
        G A        G      |   | | |     G
      T     G A C G       G C C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     GTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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