The detailed information of tRNA gene sequence


Sequence ID>W131179260
Genome IDARMF01000009
Search identical group
Phylum/ClassAcidobacteriota
SpeciesBryobacterales bacterium KBS 96 KBS 96 [ARMF]
Start position on genome 1072307
End posion on genome 1072401
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aatcgcgtct
tRNA gene sequence 
GGAAGCTAGACTCTGCCGGTGCAGGGCCCGGTCTTCAAAACCGGCGTGCGGCGCTTTGTG
TCACGGGTGGGTTCGACTCCCACTAGCTTCCGCCA
Downstream region at tRNA end position 
gcttaagcta
Secondary structure (Cloverleaf model)
>W131179260	SeC(p)	TCA
                   t      GCCA gcttaagcta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     T - A
                     A - T          T C
                    G     C A C C C     A
      C C G        A      | | | | |     G
    G       T C T C       G T G G G     C
    G       | | + |                 T T
    T       A G G G
      G C          C     CGTGCGGCGCTTTGTGTCACGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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