The detailed information of tRNA gene sequence


Sequence ID>W131179841
Genome IDARMS01000030
Search identical group
Phylum/ClassActinomycetota
SpeciesActinomadura atramentaria DSM 43919 [ARMS]
Start position on genome 122503
End posion on genome 122593
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttcgtgccct
tRNA gene sequence 
GGAGGGTTCGCATAGTGGACGAGTGCGGCGGCCTTGAAAGCCGTTGAGGCGGTGTCCCCG
TCTCCGTGGGTTCGAATCCCACACCCTCCGCtc
Downstream region at tRNA end position 
acgcgctccg
Secondary structure (Cloverleaf model)
>W131179841	Ser	TGA
                   t      GCtc acgcgctccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    A       G T G C
      C G A        G     TGAGGCGGTGTCCCCGTCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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