The detailed information of tRNA gene sequence


Sequence ID>W131180046
Genome IDARMV01000028
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesThioalkalivibrio sp. ALSr1 [ARMV]
Start position on genome 196659
End posion on genome 196584
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ttcgtaccgg
tRNA gene sequence 
GGGCCGTTAGCTCAATTGGTAGAGCAGTGGACTCTTAATCCATTGGTTGAAGGTTCGATT
CCTTCACGGCCCACCA
Downstream region at tRNA end position 
tctttctgta
Secondary structure (Cloverleaf model)
>W131180046	Lys	CTT
                   g      ACCA tctttctgta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     C T T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTT
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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