The detailed information of tRNA gene sequence


Sequence ID>W131182225
Genome IDARQF01000016
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesHalodesulfovibrio aestuarii subsp. aestuarii DSM 17919 = ATCC 29578 [ARQF]
Start position on genome 98102
End posion on genome 98176
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tctcttttga
tRNA gene sequence 
GGCGACATAGCCAAGCGGTAAGGCAGAGGTCTGCAAAATCTCCATTCTCCGGTTCAAATC
CGGATGTCGCCTCCA
Downstream region at tRNA end position 
ctcaaaagcg
Secondary structure (Cloverleaf model)
>W131182225	Cys	GCA
                   a      TCCA ctcaaaagcg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     A G G C C     A
        G A        A      | | | | |     A
      C     A C C G       T C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATTC
                    G - C
                    A - T
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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