The detailed information of tRNA gene sequence


Sequence ID>W131182273
Genome IDARQF01000020
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesHalodesulfovibrio aestuarii subsp. aestuarii DSM 17919 = ATCC 29578 [ARQF]
Start position on genome 554783
End posion on genome 554692
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacataacac
tRNA gene sequence 
GGAGAGGTGGCAGAGCTCGGTTGAACGCGGCGGTCTTGAAAACCGTTGAAGGTTTGCGCC
TTCCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tgatattaag
Secondary structure (Cloverleaf model)
>W131182273	Ser	TGA
                   c      GCCA tgatattaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | + | | |     G
  C         G A C G       G G G G G     C
  G             | |                 T T
  G         A C G C
    T T G A        G     TGAAGGTTTGCGCCTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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