The detailed information of tRNA gene sequence


Sequence ID>W131182952
Genome IDARRI01000014
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesVerrucomicrobia bacterium SCGC AAA164-I21 [ARRI]
Start position on genome 10773
End posion on genome 10863
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aacatgtgct
tRNA gene sequence 
GGAAGGGTGGCTGAGTTGGTTGAAGGTACCTGACTCGAAATCAGGCGATGGAGCAATCCA
TCCGGGGGTTCAAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
gtgagtaagc
Secondary structure (Cloverleaf model)
>W131182952	Ser	CGA
                   t      GCCA gtgagtaagc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        G      | + | | |     A
  G         G T C G       G G G G G     C
  G           + | +                 T T
  T         A G G T
    T G A          A     CGATGGAGCAATCCATCC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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