The detailed information of tRNA gene sequence


Sequence ID>W1711178846
Genome IDLWHC01000042
Search identical group
Phylum/ClassCyanobacteriota
SpeciesCyanobacterium sp. IPPAS B-1200 [LWHC]
Start position on genome 35838
End posion on genome 35911
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acttgcctaa
tRNA gene sequence 
CGAGATGTAGCGCAGCTTGGTAGCGCGCCTGCTTTGGGAGCAGGATGCCGCAGGTTCAAA
TCCTGTCATCTCGAtat
Downstream region at tRNA end position 
atgctcaaaa
Secondary structure (Cloverleaf model)
>W1711178846	Pro	TGG
                   a      Atat atgctcaaaa
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     ATGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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