The detailed information of tRNA gene sequence


Sequence ID>W1711178880
Genome IDLWHC01000114
Search identical group
Phylum/ClassCyanobacteriota
SpeciesCyanobacterium sp. IPPAS B-1200 [LWHC]
Start position on genome 80053
End posion on genome 80141
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggttggacaT
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGCGGCAGTCTCGAAAATTGTTAAGGGGTAATACCCT
TCGGGGGTTCGAATCCCCCCCTCTCCGTtt
Downstream region at tRNA end position 
attagtccga
Secondary structure (Cloverleaf model)
>W1711178880	Ser	CGA
                   T      GTtt attagtccga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TAAGGGGTAATACCCTTC
                    G + T
                    C - G
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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