The detailed information of tRNA gene sequence


Sequence ID>W131188143
Genome IDASAI01000040
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesSalinivibrio costicola subsp. costicola ATCC 33508 = LMG 11651 [ASAI]
Start position on genome 41239
End posion on genome 41163
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cactacttat
tRNA gene sequence 
AGGGGTATAGCTCCAACTGGCAGAGCAGCGGATTCCAAATCCGCGTGTTGGGGGTTCGAA
TCCCTCTACCCCTGCCA
Downstream region at tRNA end position 
cctaaaaagc
Secondary structure (Cloverleaf model)
>W131188143	Trp	CCA
                   t      GCCA cctaaaaagc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C T C C C     A
      A A C        A      | + | | |     G
    C       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     GTGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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