The detailed information of tRNA gene sequence


Sequence ID>W1711190360
Genome IDLWRZ01000217
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus thiooxidans [LWRZ]
Start position on genome 7807
End posion on genome 7883
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cacggccttt
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCATATGGTTTGGAACCATAGGGTCGCCGGTTCAAA
TCCGGCCATCCCGACCA
Downstream region at tRNA end position 
atttatggat
Secondary structure (Cloverleaf model)
>W1711190360	Pro	TGG
                   t      ACCA atttatggat
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     G - C          T A
                    T     C G G C C     A
      C G A        A      | | | | |     A
    C       C G C G       G C C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    A - T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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