The detailed information of tRNA gene sequence


Sequence ID>W1711190465
Genome IDLWSA01000290
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus thiooxidans [LWSA]
Start position on genome 5359
End posion on genome 5284
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gcagtaaatc
tRNA gene sequence 
GGGGCCGTAGCTCAGTCGGGAGAGCGCTTGCATGGCATGCAAGAGGTCGGGGGTTCGATC
CCCCCTGGCTCCACCA
Downstream region at tRNA end position 
attttgggac
Secondary structure (Cloverleaf model)
>W1711190465	Ala	GGC
                   c      ACCA attttgggac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G + T          C T
                    T     C C C C C     A
      T G A        A      | | | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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