The detailed information of tRNA gene sequence


Sequence ID>W1711190652
Genome IDLWSD01000032
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus thiooxidans [LWSD]
Start position on genome 15170
End posion on genome 15259
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaccattttt
tRNA gene sequence 
GGAAGATTGACCGAATTGGTAAGGAACCGGACTGCTAATCCGGCGATCCCGAAAGGGGTT
TTGCAGGTTCGAGTCCTGCATCTTCCGCCA
Downstream region at tRNA end position 
ttttctatgg
Secondary structure (Cloverleaf model)
>W1711190652	Ser	GCT
                   t      GCCA ttttctatgg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          T G
                    T     C G T C C     A
      T A A        G      | | | | |     G
    T       G C C A       G C A G G     C
    G         | |                   T T
    G       A G G A
      T A          A     CGATCCCGAAAGGGGTTTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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