The detailed information of tRNA gene sequence


Sequence ID>W1711190705
Genome IDLWSD01000192
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus thiooxidans [LWSD]
Start position on genome 44350
End posion on genome 44260
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcagcctca
tRNA gene sequence 
GGAGAGGTGACCGAGCGGCCGAAGGTGCAGCACTGGAAATGCTGTGTACTCCAAAAGGGT
ACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
atattatatg
Secondary structure (Cloverleaf model)
>W1711190705	Ser	GGA
                   a      GCCA atattatatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C A       G T G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTACTCCAAAAGGGTACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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