The detailed information of tRNA gene sequence


Sequence ID>W1711191086
Genome IDLWSI01000017
Search identical group
Phylum/ClassPlanctomycetota
SpeciesMariniblastus fucicola FC18 [LWSI]
Start position on genome 92231
End posion on genome 92132
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tcattgctcg
tRNA gene sequence 
GGAAGTGCTTGTTCGGCTGGTGCCGGCCGCGGTCTTCAAAACCGTAGGGCCGCATGGAAA
TCATGTGGTCGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
aactacttct
Secondary structure (Cloverleaf model)
>W1711191086	SeC(p)	TCA
                   g      GCCA aactacttct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    T     T A C C C     A
      C G G        T      + | | | |     G
    T       C T T G       G T G G G     C
    G         + + |                 T T
    G       C G G C
      T G C        C     AGGGCCGCATGGAAATCATGTGGTCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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