The detailed information of tRNA gene sequence


Sequence ID>W131192078
Genome IDASKJ01000014
Search identical group
Phylum/ClassUnclassified
SpeciesBRC1 bacterium SCGC AAA252-M09 BRC1 bacterium SCGC AAA252-M09 [ASKJ]
Start position on genome 9599
End posion on genome 9508
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcagccgtgc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTGAAGGAGCTCGCCTCGAAAGCGAGTGAGGGCATTACGTCC
CTCCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tctagtttta
Secondary structure (Cloverleaf model)
>W131192078	Ser	CGA
                   c      GCCA tctagtttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TGAGGGCATTACGTCCCTCC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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