The detailed information of tRNA gene sequence


Sequence ID>W131192080
Genome IDASKJ01000113
Search identical group
Phylum/ClassUnclassified
SpeciesBRC1 bacterium SCGC AAA252-M09 BRC1 bacterium SCGC AAA252-M09 [ASKJ]
Start position on genome 9904
End posion on genome 9979
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcactcatga
tRNA gene sequence 
GGGCCCATAGCTCAGTGGTTAGAGCCGCCGGCTCATAACCGGTTGGTCCTAGGTTCGAAT
CCTAGTGGGCCCACCA
Downstream region at tRNA end position 
cttttccgnn
Secondary structure (Cloverleaf model)
>W131192080	Met	CAT
                   a      ACCA cttttccgnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G A T C C     A
      T G A        A      | | | | |     G
    G       C T C G       C T A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          C     TGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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