The detailed information of tRNA gene sequence


Sequence ID>W131192640
Genome IDASMK01000019
Search identical group
Phylum/ClassArmatimonadota
SpeciesArmatimonadetes bacterium JGI 0000077-K19 [ASMK]
Start position on genome 2597
End posion on genome 2511
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgtaccacgc
tRNA gene sequence 
GGAGGGGTCGCATAGTGGTCGAGTGCGCCCGCCTCGAAAGCGGGTAGGCCAAAAGCCTCG
CGGGTTCGAATCCCGCCCCCTCCGCCG
Downstream region at tRNA end position 
tcactccgcc
Secondary structure (Cloverleaf model)
>W131192640	Ser	CGA
                   c      GCCG tcactccgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G C G G G     C
    G       + | | |                 T T
    T       G T G C
      C G A        G     TAGGCCAAAAGCCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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