The detailed information of tRNA gene sequence


Sequence ID>W131192650
Genome IDASML01000007
Search identical group
Phylum/ClassUnclassified
SpeciesBRC1 bacterium SCGC AAA257-C11 BRC1 bacterium SCGC AAA257-C11 [ASML]
Start position on genome 5389
End posion on genome 5478
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtaataaaag
tRNA gene sequence 
GGTGGGGTGGCCGAGTGGTTGAAGGCACCGGTCTTGAAAATCGGCGTGCGGGCAACCGTA
CCGTGGGTTCGAATCCCACCCCCACCGCCA
Downstream region at tRNA end position 
gtcgaatata
Secondary structure (Cloverleaf model)
>W131192650	Ser	TGA
                   g      GCCA gtcgaatata
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CGTGCGGGCAACCGTACC
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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