The detailed information of tRNA gene sequence


Sequence ID>W131192665
Genome IDASMM01000001
Search identical group
Phylum/ClassUnclassified
SpeciesAerophobetes bacterium JGI 0000014-A15 CD12 bacterium JGI 0000014-A15 [ASMM]
Start position on genome 5344
End posion on genome 5429
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aataaaaaaa
tRNA gene sequence 
GGAGGGATGTCCGAATAGGCAAGGAGCCGGTCTTGAAAATCGGTGAAAGGTGAAAGCCTG
TCTGGGTTCGAGTCCCAGTCCCTCCGttt
Downstream region at tRNA end position 
ttatttttaa
Secondary structure (Cloverleaf model)
>W131192665	Ser	TGA
                   a      Gttt ttatttttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     G A C C C     A
      T A A        G      | | | | |     G
    A       G C C T       C T G G G     C
    G         | | |                 T T
    G       A G G A
      C A          G     TGAAAGGTGAAAGCCTGT
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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