The detailed information of tRNA gene sequence


Sequence ID>W131192666
Genome IDASMM01000001
Search identical group
Phylum/ClassUnclassified
SpeciesAerophobetes bacterium JGI 0000014-A15 CD12 bacterium JGI 0000014-A15 [ASMM]
Start position on genome 5955
End posion on genome 6044
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaaattact
tRNA gene sequence 
GGAGAGGTGACTGAGTGGTCGAAAGTGCGCGATTGGAAATCGCGTGGAGGGTAAAAACTT
TCCCGAGGGTTCGAATCCCTCCCTCTCCGCtc
Downstream region at tRNA end position 
ttattattaa
Secondary structure (Cloverleaf model)
>W131192666	Ser	GGA
                   t      GCtc ttattattaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C A       G A G G G     C
    G         | | |                 T T
    T       A A G T
      C G A        G     TGGAGGGTAAAAACTTTCCC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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