The detailed information of tRNA gene sequence


Sequence ID>W131192696
Genome IDASMN01000042
Search identical group
Phylum/ClassUnclassified
SpeciesAerophobetes bacterium SCGC AAA255-F10 CD12 bacterium SCGC AAA255-F10 [ASMN]
Start position on genome 8920
End posion on genome 8827
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaagaattct
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGTCGCCTGCTAAGCGATTAAGCGCTCATAAAGG
TGCTTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ctgcaaccaa
Secondary structure (Cloverleaf model)
>W131192696	Ser	GCT
                   t      GCCA ctgcaaccaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAAGCGCTCATAAAGGTGCTTC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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