The detailed information of tRNA gene sequence


Sequence ID>W131192709
Genome IDASMT01000007
Search identical group
Phylum/ClassUnclassified
SpeciesCalescamantes bacterium JGI 0000106-N5 EM 19 bacterium JGI 0000106-N5 [ASMT]
Start position on genome 10236
End posion on genome 10327
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cccagccaaa
tRNA gene sequence 
GGAGGGGTGTCCGAGCGGCCTAAGGAGCGTGGCTGGAAACCACGTGCCCTGTAAAAAGGG
GCGCACGGGTTCAAATCCCGTCCCCTCCGCCC
Downstream region at tRNA end position 
aataaaaaaa
Secondary structure (Cloverleaf model)
>W131192709	Ser	GGA
                   a      GCCC aataaaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        G      | | | | |     A
    G       G C C T       A C G G G     C
    G         | | |                 T T
    C       A G G A
      C T A        G     TGCCCTGTAAAAAGGGGCGC
                    C - G
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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