The detailed information of tRNA gene sequence


Sequence ID>W131192790
Genome IDASMW01000031
Search identical group
Phylum/ClassUnclassified
SpeciesCalescamantes bacterium JGI 0000106-M22 EM 19 bacterium JGI 0000106-M22 [ASMW]
Start position on genome 1684
End posion on genome 1595
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agttttagga
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGACGAACGGGGCGGACTCGAAATCCGTTGGGGGTTTTTCCTCC
TCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
aagaaaattt
Secondary structure (Cloverleaf model)
>W131192790	Ser	CGA
                   a      GCCA aagaaaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G G C C       G T G G G     C
    G         | | |                 T T
    A       A C G G
      C G A        G     TGGGGGTTTTTCCTCCTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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