The detailed information of tRNA gene sequence


Sequence ID>W131192810
Genome IDASMX01000023
Search identical group
Phylum/ClassUnclassified
SpeciesCalescamantes bacterium JGI 0000106-I17 EM 19 bacterium JGI 0000106-I17 [ASMX]
Start position on genome 17008
End posion on genome 16932
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaagcttctT
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCGA
GTCCCTCCACCGCCAAtg
Downstream region at tRNA end position 
gttatttctc
Secondary structure (Cloverleaf model)
>W131192810	Met	CAT
                   T      AAtg gttatttctc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
    T T G A        A      | + | | |     G
  G         C T C G       G G G G G     C
  G         | | | |                 T T
  T         G A G C
    T T A          A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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