The detailed information of tRNA gene sequence


Sequence ID>W131192816
Genome IDASMY01000008
Search identical group
Phylum/ClassUnclassified
SpeciesCalescamantes bacterium JGI 0000106-H18 EM 19 bacterium JGI 0000106-H18 [ASMY]
Start position on genome 15889
End posion on genome 15798
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaaagaaata
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTCTAAGGCAACAGCCTGCTAAGCTGTGGCGGGTTAAATCCTG
CCTCGCGGGTTCAAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
tatcactttt
Secondary structure (Cloverleaf model)
>W131192816	Ser	GCT
                   a      GCCA tatcactttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        A     GGCGGGTTAAATCCTGCCTC
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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