The detailed information of tRNA gene sequence


Sequence ID>W131192909
Genome IDASNF01000017
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Altimarinus pacificus GN02 bacterium JGI 0000068-E11 [ASNF]
Start position on genome 12744
End posion on genome 12818
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tttattatat
tRNA gene sequence 
GTCTACATAGTTCAATGGATAGAATAACTCCCTCCTAAGGAGTAGATTCTGGTTCGATTC
CAGATGTGGATACCA
Downstream region at tRNA end position 
acgtgttttt
Secondary structure (Cloverleaf model)
>W131192909	Arg	CCT
                   t      ACCA acgtgttttt
                     G + T
                     T - A
                     C - G
                     T + G
                     A - T
                     C - G
                     A - T          T T
                    T     A G A C C     A
      T A A        A      | | | | |     G
    G       C T T G       T C T G G     C
    G       | | | +                 T T
    A       G A A T
      T A          A     AGAT
                    A - T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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