The detailed information of tRNA gene sequence


Sequence ID>W131193338
Genome IDASOC01000005
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Omnitrophus fodinae OP3 bacterium SCGC AAA011-A17 [ASOC]
Start position on genome 37337
End posion on genome 37411
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tactgaatcc
tRNA gene sequence 
GGCACGGTAGCCAAGCGGTAAGGCAGGAGTCTGCAAAACTCTTATACACCGGTTCGATTC
CGGTCCGTGCCTCCA
Downstream region at tRNA end position 
ctctcgccgg
Secondary structure (Cloverleaf model)
>W131193338	Cys	GCA
                   c      TCCA ctctcgccgg
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C
                     G - C          T T
                    T     T G G C C     A
        G A        A      | | | | |     G
      C     A C C G       A C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATAC
                    G + T
                    G - C
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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