The detailed information of tRNA gene sequence


Sequence ID>W131193736
Genome IDASOY01000016
Search identical group
Phylum/ClassAtribacterota
SpeciesAtribacteria bacterium JGI 0000079-L04 OP9 bacterium JGI 0000079-L04 [ASOY]
Start position on genome 16394
End posion on genome 16488
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gagttaaaaa
tRNA gene sequence 
GGAGAGGTGGCTGAGTCCGGTTGAAGGCGCTCGACTCGAAATCGAGTAGGCAGGTAGCCC
CTGTCTCGCGGGTTCAAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
attagtaagt
Secondary structure (Cloverleaf model)
>W131193736	Ser	CGA
                   a      GCCA attagtaagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C T G A        G      | | | | |     A
  C         G T C G       G C G G G     C
  G           + | |                 T T
  G         A G G C
    T T G A        G     TAGGCAGGTAGCCCCTGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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