The detailed information of tRNA gene sequence


Sequence ID>W131193797
Genome IDASPC01000002
Search identical group
Phylum/ClassAtribacterota
SpeciesAtribacteria bacterium SCGC AAA255-N14 OP9 bacterium SCGC AAA255-N14 [ASPC]
Start position on genome 12500
End posion on genome 12407
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caaagatgaa
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCATAACGGGGTCGCTTGGAGAGCGATTAGGCGGCCAAAAGC
TGTCACGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gttttaaaat
Secondary structure (Cloverleaf model)
>W131193797	Ser	GGA
                   a      GCCA gttttaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G C G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TAGGCGGCCAAAAGCTGTCAC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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