The detailed information of tRNA gene sequence


Sequence ID>W1711236418
Genome IDLYDR01000110
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctopirus hydrillae JC280 [LYDR]
Start position on genome 87988
End posion on genome 88062
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cttgcggctT
tRNA gene sequence 
ACGGGTGTAGCTCAATTGGCAGAGCAGCGGATTCCAAATCCGCAGGTTGGGGGTTCGAGT
CCCTCCGCCCGTGTtt
Downstream region at tRNA end position 
gcggtgagat
Secondary structure (Cloverleaf model)
>W1711236418	Trp	CCA
                   T      GTtt gcggtgagat
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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