The detailed information of tRNA gene sequence


Sequence ID>W1711236422
Genome IDLYDR01000110
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctopirus hydrillae JC280 [LYDR]
Start position on genome 175229
End posion on genome 175152
Amino Acid Pseudo
Anticodon GTT
Upstream region at tRNA start position 
ctgatcttac
tRNA gene sequence 
TCCGGTGGGTCCTGTGCTGGTACGGGAAGGCGACTGTTAATCGCCTCGACGCAGGTTCGA
TTCCTGCCGCCGGAGCCT
Downstream region at tRNA end position 
ttttcgaagt
Secondary structure (Cloverleaf model)
>W1711236422	Pseudo	GTT
                   c      GCCT ttttcgaagt
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T T
                    G     C G T C C     A
    C G T G        G      | | | | |     G
  T         T C C T       G C A G G     C
  G         + | | |                 T T
  G         G G G A
    T A C          A     TCGAC
                    G - C
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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