The detailed information of tRNA gene sequence


Sequence ID>W131205841
Genome IDATFD01000006
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema socranskii subsp. paredis ATCC 35535 [ATFD]
Start position on genome 48506
End posion on genome 48592
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tacgtctttT
tRNA gene sequence 
GGAGCGATGTCCGAGCGGTCGATGGAGGTAGTCTTGAAAACTATTGAGGAGCAATCCTCC
GGGGGTTCGAATCCCTCTCGCTCCGGac
Downstream region at tRNA end position 
agcaaaatcg
Secondary structure (Cloverleaf model)
>W131205841	Ser	TGA
                   T      GGac agcaaaatcg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C T       G G G G G     C
    G       + | | |                 T T
    T       T G G A
      C G A        G     TGAGGAGCAATCCTCC
                    G + T
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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