The detailed information of tRNA gene sequence


Sequence ID>W131205844
Genome IDATFD01000006
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema socranskii subsp. paredis ATCC 35535 [ATFD]
Start position on genome 48872
End posion on genome 48959
Amino Acid Pseudo
Anticodon CGA
Upstream region at tRNA start position 
agccgcttaa
tRNA gene sequence 
GGAAAGATGCGAGAGTGGTCGATCCGGACGGTCTCGAAAACCGTTGAACCCTTTGGGGTT
CCGGGGGTTCGAATCCCCCTCTTTCCGCtt
Downstream region at tRNA end position 
aacggatatt
Secondary structure (Cloverleaf model)
>W131205844	Pseudo	CGA
                   a      GCtt aacggatatt
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G G G G G     C
    G       +   | |                 T T
    T       T C C G
      C G A        G     TGAACCCTTTGGGGTTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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