The detailed information of tRNA gene sequence


Sequence ID>W131205863
Genome IDATFD01000015
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema socranskii subsp. paredis ATCC 35535 [ATFD]
Start position on genome 11033
End posion on genome 10961
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gcacatattt
tRNA gene sequence 
GCCAACTTAGCTCATCCGGTAGAGCATCGCATTCGTAATGCGGCGGTGATCGGTTCAAGT
CCGGTAGTTGGCTttt
Downstream region at tRNA end position 
ttatcgtatc
Secondary structure (Cloverleaf model)
>W131205863	Thr	CGT
                   t      Tttt ttatcgtatc
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     C - G
                     T - A          T G
                    T     T G G C C     A
      C T A        A      | + | | |     A
    C       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTG
                    T + G
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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