The detailed information of tRNA gene sequence


Sequence ID>W131205874
Genome IDATFE01000003
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema medium ATCC 700293 [ATFE]
Start position on genome 353807
End posion on genome 353721
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaccgattaT
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGTTGTGCTGCGAGGTACC
GGGGGTTCGAATCCCCCCTGCTCCGTaa
Downstream region at tRNA end position 
aataggcggc
Secondary structure (Cloverleaf model)
>W131205874	Ser	TGA
                   T      GTaa aataggcggc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G + T
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTGCTGCGAGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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