The detailed information of tRNA gene sequence


Sequence ID>W131205882
Genome IDATFE01000003
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema medium ATCC 700293 [ATFE]
Start position on genome 206677
End posion on genome 206603
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgccgtacaT
tRNA gene sequence 
CGCAGGGTAGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGGAAGTCGTAGGTTCAAGT
CCTACCCCTGCTAAgt
Downstream region at tRNA end position 
ttgaaaaggc
Secondary structure (Cloverleaf model)
>W131205882	Met	CAT
                   T      AAgt ttgaaaaggc
                     C   T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C G A G       G T A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AAGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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