The detailed information of tRNA gene sequence


Sequence ID>W131205899
Genome IDATFE01000008
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema medium ATCC 700293 [ATFE]
Start position on genome 131285
End posion on genome 131210
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gttgcctttT
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGCTAGAGCGCTTGCATGGCATGCAAGAGGTCAGGGGTTCAAT
TCCCCTCACCTCCAAat
Downstream region at tRNA end position 
aaaataatcc
Secondary structure (Cloverleaf model)
>W131205899	Ala	GGC
                   T      AAat aaaataatcc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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