The detailed information of tRNA gene sequence


Sequence ID>W1711256955
Genome IDLYTA01000040
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctomycetaceae bacterium BBD 1991-11 [LYTA]
Start position on genome 5374
End posion on genome 5287
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgagggcccc
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTTGAATGCGCTGGTCTCGAAAACCAGTATCGAGTTTTCTCGA
TCGGGGGTTCGAATCCCCCCCTCTCCGCtt
Downstream region at tRNA end position 
tcatgaacga
Secondary structure (Cloverleaf model)
>W1711256955	Ser	CGA
                   c      GCtt tcatgaacga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TATCGAGTTTTCTCGATC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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