The detailed information of tRNA gene sequence


Sequence ID>W131211822
Genome IDATND01000002
Search identical group
Phylum/ClassChlamydiota
SpeciesChlamydia avium 10_881_SC42 [ATND]
Start position on genome 25679
End posion on genome 25591
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attattgcaT
tRNA gene sequence 
GGAAGAGTGGCAGAGTGGTCGAATGCATCTGATTCGAAATCAGAAGTTCTCTTGCGGGAA
CCAGGGGTTCGAATCCCCTCTCTTCCGAgt
Downstream region at tRNA end position 
ttctttttct
Secondary structure (Cloverleaf model)
>W131211822	Ser	CGA
                   T      GAgt ttctttttct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       A G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     AGTTCTCTTGCGGGAACC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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