The detailed information of tRNA gene sequence


Sequence ID>W131213720
Genome IDATTF01000040
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter ubique ubique HIMB058 [ATTF]
Start position on genome 2370
End posion on genome 2446
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
taacggggat
tRNA gene sequence 
GCAGCAGTAGCTCAGTTGGTTAGAGCACTAGTTTGTGGAACTAGGGGTCGGTGGTTCGAA
TCCACCCTGCTGTACCA
Downstream region at tRNA end position 
aacaatgaca
Secondary structure (Cloverleaf model)
>W131213720	His	GTG
                   t      ACCA aacaatgaca
                     G + T
                     C - G
                     A - T
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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