The detailed information of tRNA gene sequence


Sequence ID>W131213805
Genome IDATTH01000001
Search identical group
Phylum/ClassRhodothermota
SpeciesSalisaeta longa DSM 21114 [ATTH]
Start position on genome 2166623
End posion on genome 2166532
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acatagtttt
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTCGAAGGCGCTCCCCTGCTAAGGGAGTAAACCGGGATACCGG
TTTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gttcaacgcc
Secondary structure (Cloverleaf model)
>W131213805	Ser	GCT
                   t      GCCA gttcaacgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAAACCGGGATACCGGTTTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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