The detailed information of tRNA gene sequence


Sequence ID>W131213881
Genome IDATTJ01000001
Search identical group
Phylum/ClassDeinococcota
SpeciesDeinococcus ficus 2009 [ATTJ]
Start position on genome 1412266
End posion on genome 1412353
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gccacagaac
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGCTGAAACCGCGTCCCTGCTAAGGACGTATACCGCAAGGTATC
GGGGGTTCGAATCCCCCCCTCTTCGCCA
Downstream region at tRNA end position 
cacgcaccac
Secondary structure (Cloverleaf model)
>W131213881	Ser	GCT
                   c      GCCA cacgcaccac
                     G - C
                     G + T
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        G     TATACCGCAAGGTATC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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