The detailed information of tRNA gene sequence


Sequence ID>W131215400
Genome IDATUZ01000013
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfovibrio desulfuricans subsp. desulfuricans DSM 642 [ATUZ]
Start position on genome 118719
End posion on genome 118812
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gcgcccatgc
tRNA gene sequence 
GGAGACGTTTCGTCACCGGTGTGGCGCCCGGTCTTCAAAACCGGTGGCAGGCCTTGCGGT
CTGTGGTAGGTTCGACCCCTATACGTCTCCGCCA
Downstream region at tRNA end position 
ttcaagctct
Secondary structure (Cloverleaf model)
>W131215400	SeC(p)	TCA
                   c      GCCA ttcaagctct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C
                     T - A          C C
                    T     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGCAGGCCTTGCGGTCTGTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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