The detailed information of tRNA gene sequence


Sequence ID>W131215486
Genome IDATVA01000019
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesPaucidesulfovibrio longus DSM 6739 [ATVA]
Start position on genome 17699
End posion on genome 17623
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taatatacgc
tRNA gene sequence 
GGAGCCGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCACGCCGGAGGCCGCGAGTTCGAG
TCTCGTCGGCTCCGCCA
Downstream region at tRNA end position 
gatagtcaaa
Secondary structure (Cloverleaf model)
>W131215486	Asp	GTC
                   c      GCCA gatagtcaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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