The detailed information of tRNA gene sequence


Sequence ID>W131217459
Genome IDATWV01000011
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema bryantii NK4A124 [ATWV]
Start position on genome 118430
End posion on genome 118518
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aattacattT
tRNA gene sequence 
GGAAAGATGTCCGAGCGGTTTAAGGTACACCCTTGGAAGGGGTGCGCAGCAGAAATGCTG
CCGGGAGTTCGAATCTCCCTCTTTCCGTta
Downstream region at tRNA end position 
ttttaatata
Secondary structure (Cloverleaf model)
>W131217459	Ser	GGA
                   T      GTta ttttaatata
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     C C C T C     A
      C G A        G      | | | | |     G
    G       G C C T       G G G A G     C
    G         | |                   T T
    T       A G G T
      T T A        A     CGCAGCAGAAATGCTGCC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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