The detailed information of tRNA gene sequence


Sequence ID>W131217462
Genome IDATWV01000016
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema bryantii NK4A124 [ATWV]
Start position on genome 44832
End posion on genome 44760
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catcattttc
tRNA gene sequence 
GGGCCATTAGCTCAGTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCAAAGTTCAAGT
CTTTGATGGCCCAttt
Downstream region at tRNA end position 
tttaaggatt
Secondary structure (Cloverleaf model)
>W131217462	Met	CAT
                   c      Attt tttaaggatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G T T T C     A
      T G A        A      | | | | |     A
    G       C T C G       C A A A G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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